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Lab Attendance

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Lab 1 Activities

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First Lecture

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Inserting Image

Red White Blood cells 01.jpg

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Individual Assessments

Lab 1

Origin of eukaryotes from prokaryotes.jpg

The Origin of Eukaryotes from Prokaryotes by Time and Genetic Distance

Nick Lane Energetics and genetics across the prokaryote-eukaryote divide. Biol. Direct: 2011, 6();35 PMID:21714941

Copyright ©2011 Lane; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Lab 2

Origin of eukaryotes from prokaryotes.jpg

Endosymbiotic origin of eukaryotes by time and genetic distance [1]

Research Article Using Confocal Microscopy

Metamorphosis of mesothelial cells with active horizontal motility in tissue culture

The aim of this study was to investigate and provide evidence to support the migration and morphological change of mesothelial cells during tissue injury response. By using confocal microscopy imaging Nagai and peers, 2013, were able to observe clearly delineated mesothelial cells within ex vivo mouse abdominal wall tissue culture, as well as transformed mesothelial cells (MeT5A) in in-vivo tissue culture and witness their morphological transition from flat cells to cuboidal cells. This transition was able to be observed as confocal microscope analysis allows for the control in the depth of field and eliminates/reduces background matter, so that mesothelial cells positioned on top of each other can be differentiated. In addition, these confocal microscopy techniques also allowed the researchers to observe the horizontal migration of these mesothelial cells across the tissue culture, moving through gaps between surrounding cells. These findings provided evidence in support of the change and migration of mesothelial cells during injury response. [2]

Lab 3

Paper 1: Nuclear envelope breakdown in starfish oocytes proceeds by partial NPC disassembly followed by a rapidly spreading fenestration of nuclear membranes

Lenart and co-workers (2003)examined the breakdown of the nuclear envelope in live starfish oocytes using various techniques involving fluorescently labeled dextrans (polysaccharides), membrane dyes and green fluorescently tagged proteins (GFP-tagged proteins), in conjunction with confocal time-lapse microscopy and electron microscopy which allowed them to view the changes in the oocyte nuclear envelope. Through the use of different sized fluorescently labelled dextran fractions experimenters were able to analyse the changes in the permeability of the nuclear envelope in maturing starfish oocytes. They firstly observed a sequential entry of dextran molecules, beginning with the smaller molecules entering the nucleus followed by larger molecules with diameters up to 40nm. The use of GFP-tagged nucleoporins revealed a corresponding gradual loss of peripheral nucleoporins from Nuclear Pore Complexes (NPC) (selective aqueous channels that span both nuclear membranes, connecting the nucleus with the cell cytoplasm) which resulted in the dilation of these channels from 10 to 40nm and a gradual release of import substrates. It was clearly noted, however, that the core of NPCs remained intact. Another key observation which was made was that the nuclear envelope structure remained unaffected. Next a rapid complete permeabilisation of the nuclear envelope that spread throughout the nuclear surface was noted, allowing macromolecules of diameters up to 100nm to enter the nucleus, this proposed the complete removal of the remaining core of the NPCs. It was also found that at the electron microscope level the nuclear envelope was fenestrated in the end. These experimenters therefore concluded that the breakdown of the nuclear envelope occurred in two distinct sequential phases:

-Phase 1 involves the gradual disassembly of the NPCs, which coincides with an increase in nuclear membrane/envelope permeability allowing for some macromolecules to enter the nucleus and nuclear import substrates to leave. At the end of this first phase the nuclear envelope remains intact.

-Phase 2 is characterised by an increase and rapid spreading nuclear envelope permeability as well as apparent fenestration of the nuclear envelope and hence its breakdown resulting from the removal of the core of NPCs. [3]

This research paper is relevant to the nuclear envelope breakdown section as it provides an experiment which clearly shows evidence of how the nuclear envelope gradually breaks down and explores the role of NPCs in this.

Nuclear Envelope and its Proteins

Paper 2: A role for gp210 in mitotic nuclear-envelope breakdown

This paper explores the importance of the Nuclear Pore Complex (NPC) transmembrane nucleoporin, gp210, in the breakdown of the nuclear envelope. Galy and his colleagues subjected Caenorhabditis elegans (worm) egg extracts to RNAi-mediated deletion or mutation of the gp210 nucleoporin which resulted in the prevention of lamin depolymerisation, a late event which aids in the breakdown of the nuclear envelope. The prevention of lamin depolarisation results in the inability of the nuclear envelope to breakdown and also blocks pronulclear chromosome mixing that ultimately leads to the formation of two nuclei after mitosis. This implied that gp210 was key in nuclear envelope breakdown.

The block of gp210 phosphorylation which is conducted by cyclin-B-cdc2 (proposed to be an important trigger for the initiation of mitosis) was also explored. Depletion of the cyclin-B-cdc2, achieved through RNAi, resulted in the inability of the gp210 nucleoporin to be phosphorylated and achieve nuclear envelope breakdown. Hence, this provided further evidence that gp210, particularly its phosphorylation, was indeed an early step in the breakdown of the nuclear envelope.

This research article is relevant to the subheading Nuclear Envelope Breakdown as it suggests one of the nucleoporins involved in the breakdown of the nuclear envelope. [4]


  1. <pubmed>PMC3152533</pubmed>
  2. <pubmed>23359855</pubmed>
  3. <pubmed>PMC2172766</pubmed>
  4. <pubmed>18216332</pubmed>