Difference between revisions of "Movies"

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==Introduction==
  
This page links to movies demonstrating concepts and findings in Cell Biology.  
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[[File:Mark08.jpg|150px|thumb]]
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This page links to movies demonstrating concepts and findings in Cell Biology. Note that some videos on this current page are classified as a specific topic, but may well include concepts in other cell biology topics (e.g. exocytosis, Golgi or cytoskeleton). Each movie is listed only once on the page, opening the movie page can identify additional concepts covered.
  
* Many of the links will take you to external internet resources.
 
* The internet is dynamic and some external addresses may change over time.
 
* There are a range of different movie formats, some of which may not be supported by all browsers.
 
  
== Movie Types ==
+
* Some of the links will take you to external internet resources.
 +
* Note that the dynamic nature of the internet may mean some external addresses may change over time.
 +
* Movies are in MP4 and Quicktime format when available, some may not be supported by all browsers.
  
The 2 main linked movie types are:
 
# animations demonstrating cell biology concepts (textbooks and education sites)
 
# from living cells showing dynamic processes (research labs and papers)
 
  
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===Movie Types===
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# '''animations''' designed to demonstrate cell biology concepts (textbooks and education sites).
 +
# '''living cells''' designed to show dynamic processes in cells (research labs and papers).
  
== Textbook Animations ==
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External sources:
* [[Molecular Cell Biology Movies]] A series of animations demonstrating concepts in molecular cell biology based upon textbook images.
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* '''iBioSeminars''' - From the American Society for Cell Biology (ASCB) presentations by expert researchers in specific cell biology topics. [http://www.ibioseminars.org iBioSeminars]
* [http://www.youtube.com/user/garlandscience Molecular Biology of the Cell]
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* '''JoVE''' - Journal of Visualized Experiments an online journal that publishes peer-reviewed scientific video protocols. [http://www.jove.com JoVe]
  
== The Journal of Cell Biology ==
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===How to play Movies===
  
* [http://jcb.rupress.org/ Journal Homepage]
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* '''Page''' - Opens the movie page with the animation and additional information such as: a description of the movie, additional images, links, references and copyright information.
* [http://jcb.rupress.org/misc/annotatedvideo.shtml Annotated Video Collection]
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* '''Play''' - Opens just the movie in the browser window, no additional information is shown.
  
 
==Chemotaxis==
 
==Chemotaxis==
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==Exocytosis and Endocytosis==
 
==Exocytosis and Endocytosis==
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===Exocytosis===
 
{|
 
{|
 
| valign="bottom"|{{Exocytosis movie 1}}
 
| valign="bottom"|{{Exocytosis movie 1}}
 
| valign="bottom"|{{Endoplasmic reticulum movie 1}}
 
| valign="bottom"|{{Endoplasmic reticulum movie 1}}
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| valign="bottom"|{{Exocytosis movie 2}}
 +
| valign="bottom"|{{Exocytosis movie 3}}
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| valign="bottom"|{{Exocytosis movie 4}}
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|}
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===Endocytosis===
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{|
 
| valign="bottom"|{{Endosome movie 1}}
 
| valign="bottom"|{{Endosome movie 1}}
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| valign="bottom"|{{Endocytosis movie 1}}
 
|}
 
|}
  
 
==Cytoskeleton==
 
==Cytoskeleton==
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 +
[[Media:MT and MF movements.mp4|MT and MF movements]] | [[Media:Microtubule - spindle formation.mp4|Microtubule - spindle formation]]
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[[:File:MT and MF movements.mp4|About - MT and MF movements]] | [[:File:Microtubule - spindle formation.mp4|About - Microtubule - spindle formation]]
 +
===Microtubules===
 
{|
 
{|
| valign="bottom"|{{Microfilament movie 1}}
 
 
| valign="bottom"|{{Microtubule movie 1}}
 
| valign="bottom"|{{Microtubule movie 1}}
 
| valign="bottom"|{{Microtubule movie 2}}
 
| valign="bottom"|{{Microtubule movie 2}}
 +
| valign="bottom"|{{Microtubule movie 3}}
 +
|}
 +
 +
===Microfilaments===
 +
{|
 +
| valign="bottom"|{{Microfilament movie 1}}
 
|}
 
|}
  
 
==Nucleus==
 
==Nucleus==
 
{|
 
{|
| valign="bottom"|{{Nucleus movie 1}}
 
 
| valign="bottom"|{{Nucleus movie 2}}
 
| valign="bottom"|{{Nucleus movie 2}}
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| valign="bottom"|{{Cajal body movie 1}}
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| valign="bottom"|{{Cajal body movie 2}}
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| valign="bottom"|{{Cajal body movie 3}}
 +
| valign="bottom"|{{Lamin A movie 1}}
 
|}
 
|}
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===Nucleolar assembly of rRNA processing machinery in living cells===
 +
 +
'''Nucleolar Organizer Regions:'''  [[:File:PMID11381093-Nucleolar organizer regions01.mp4|movie 1 - Nop52 in PNBs and nucleoli]] | [[:File:PMID11381093-Nucleolar organizer regions02.mp4|movie 2 - fibrillarin in PNBs and NORs]] | [[:File:PMID11381093-Nucleolar organizer regions03.mp4|movie 3 - acquisition for fibrillarin]] | [[:File:PMID11381093-Nucleolar organizer regions04.mp4|movie 4 - Nop52 during telophase (pseudocolour)]] | [[:File:PMID11381093-Nucleolar organizer regions05.mp4|movie 5 - Nop52 during telophase]] | [[:File:PMID11381093-Nucleolar organizer regions06.mp4|movie 6- cell slices of Nop52 and fibrillarin]] | [[:File:PMID11381093-Nucleolar organizer regions07.mp4|movie 7 - fibrillarin flow between a PNB and a NOR]] | [[:File:PMID11381093-Nucleolar organizer regions08.mp4|movie 8 -  Nop52 in PNBs and NORs]] | [[Cell Nucleus]] | PMID 11381093
 +
 +
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===Cajal body movement===
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'''Cajal bodies:''' [[:File:PMID111340831-Cajal bodies01.mp4|movie 1 - CB dynamics]] | [[:File:PMID111340831-Cajal bodies02.mp4|movie 2 - CB association with nucleolus]] | [[:File:PMID111340831-Cajal bodies03.mp4|movie 3 - coiling and fibrillarin]] | [[Cell Nucleus]] | PMID 11134083
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===Nuclear pore complexes form immobile networks===
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'''Nuclear Pore Complex:''' [[:File:PMID11448991-Nuclear pore complexes01.mp4|movie 1 - Long term FRAP of POM121 - transmembrane nucleoporin]] | [[:File:PMID11448991-Nuclear pore complexes02.mp4|movie 2 - Long term FRAP of lamina B1]] | [[:File:PMID11448991-Nuclear pore complexes03.mp4|movie 3 - NPC movement in interphase]] | [[:File:PMID11448991-Nuclear pore complexes04.mp4|movie 4 - Lamina elasticity]] | [[Cell Nucleus]] | PMID 11448991
 +
 +
===Nuclear pore complexes redistributes in part to kinetochores in mammalian cells===
 +
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'''Nuclear Pore Complex:''' [[:File:PMID11564755-Nuclear pore complexes01.mp4|movie 1]] | [[:File:PMID11564755-Nuclear pore complexes02.mp4|movie 2]] | [[:File:PMID11564755-Nuclear pore complexes03.mp4|movie 3]] | [[:File:PMID11564755-Nuclear pore complexes04.mp4|movie 4]] | [[Cell Nucleus]] | PMID 11564755
  
 
==Mitochondria==
 
==Mitochondria==
 
{|
 
{|
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| valign="bottom"|{{Mitochondria movie 1}}
 
| valign="bottom"|{{Mitochondria movie 2}}
 
| valign="bottom"|{{Mitochondria movie 2}}
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|}
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==Adhesion==
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{|
 +
| valign="bottom"|{{Integrin movie 1}}
 
|}
 
|}
  
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| valign="bottom"|{{Apoptosis movie 1}}
 
| valign="bottom"|{{Apoptosis movie 1}}
 
|}
 
|}
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==Translation==
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{|
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| valign="bottom"|{{Translation movie 1}}
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|}
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==Methods==
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{|
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| valign="bottom"|{{Cryostat sectioning movie 1}}
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|}
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== Textbook Animations ==
 +
* [[Molecular Cell Biology Movies]] A series of animations demonstrating concepts in molecular cell biology based upon textbook images.
 +
* [http://www.youtube.com/user/garlandscience Molecular Biology of the Cell]
 +
 +
== The Journal of Cell Biology ==
 +
 +
* [http://jcb.rupress.org/ Journal Homepage]
 +
* [http://jcb.rupress.org/misc/annotatedvideo.shtml Annotated Video Collection]
 +
  
 
==ASCB iBioSeminars==
 
==ASCB iBioSeminars==
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== Quicktime Movies ==
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== External Links ==
 
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{{External Links}}
<gallery>
 
Image:Neutrophil_Rogers1950s.mov‎|Historic movie of white blood cell chasing a bacterium in a blood smear (Rogers 1950's)
 
Image:Neuron mitochodrial motility.mov|Mitochondrial motility before treatment with Dopamine. Time-lapse series showing motility of EYFP-labeled mitochondria in cultured hippocampal neurons for two hours before administration of dopamine. (0.77 MB MOV)
 
Image:Lyme Spirochete.mov|Clocking the Lyme spirochete. Malawista SE, de Boisfleury Chevance A. PLoS ONE. 2008 Feb 20;3(2):e1633. PMID: 18286190
 
Image:Translation_cartoon.mov|Cartoon animation of translation on ribosome and export into endoplasmic reticulum
 
</gallery>
 
 
 
== J Cell Biology Movies ==
 
 
 
<gallery>
 
Image:JCB200109030.v2.mov|Vesicles Display Bidirectional Motility along Microtubules PMID: 11827983
 
Image:JCB00007107.V2.mov|Video 2 (6MB) Real-time video of the formation of tubules at ER export sites in living cells PMID: 11149932
 
Image:JCB0005162.V1.mov|Video 1 (1.1MB) - A time-lapse movie of Fig. 5 A demonstrates the nucleus of an HeLaGFP-coilin cell showing CB dynamics. PMID: 11134083
 
Image:JCB 200710162 V3.mov|Video 3 - Wild-type (mouse) tracheal cilia. Images were recorded at 200 frames/s and displayed at 10 frames/s. PMID: 18250199
 
Image:JCB 200710162 V1.mov|Video 1 - Motion of wild-type (mouse) ependymal cilia. Images were recorded at 200 frames/s and displayed at 10 frames/s. PMID: 18250199
 
Image:JCB200606027.V2.mov|Video 2 - Neutrophil Extracellular Traps PMID: 17210947
 
Image:Nucleolar_assembly.mov|Nucleolar assembly of the rRNA processing machinery in living cells PMID: 11381093
 
Image:Exocytic_transport.mov‎|Exocytic transport PMID: 11331304
 
</gallery>
 
 
 
== PLoS Movies ==
 
 
 
<gallery>
 
Image:ECM fibroblast fibronectin pbio.0050268.mov|Video S1: Z-Stack Overlay of the IA/ID and DIC Images of Fibronectin Matrix in Fibroblast Culture Amine/cys Fn-DA and excess Fn-u were added to culture medium of fibroblasts for 24 h.
 
Image:Apoptosis Bcl-2.mov|Video S2: Cytoskeletal changes prior to cell death. Cells were cultured in glass-bottom dishes and placed under an Olympus spinning disc microscope. Phase contrast pictures of the cells were taken every 10 min upon infection.
 
</gallery>
 
 
 
== EMBO J Movies ==
 
* [http://www.nature.com/emboj/focus/imaging/index.html Web Focus - Imaging]
 
  
== Mark Hill Movies ==
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* '''EMBO J''' - [http://www.nature.com/emboj/focus/imaging/index.html Web Focus - Imaging]
 +
* '''iBioSeminars''' - From the American Society for Cell Biology (ASCB) presentations by expert researchers in specific cell biology topics. [http://www.ibioseminars.org iBioSeminars]
 +
* '''JoVE''' - Journal of Visualized Experiments an online journal that publishes peer-reviewed scientific video protocols. [http://www.jove.com JoVe]
  
<gallery>
 
Image:Steroid_signaling_cartoon.mov|Steroid signaling cartoon - simple animation of signaling pathway
 
</gallery>
 
  
 +
{{Footer}}
  
 
[[Category:Science-Undergraduate]][[Category:Movie]]
 
[[Category:Science-Undergraduate]][[Category:Movie]]

Latest revision as of 13:00, 28 November 2017

Introduction

Mark08.jpg

This page links to movies demonstrating concepts and findings in Cell Biology. Note that some videos on this current page are classified as a specific topic, but may well include concepts in other cell biology topics (e.g. exocytosis, Golgi or cytoskeleton). Each movie is listed only once on the page, opening the movie page can identify additional concepts covered.


  • Some of the links will take you to external internet resources.
  • Note that the dynamic nature of the internet may mean some external addresses may change over time.
  • Movies are in MP4 and Quicktime format when available, some may not be supported by all browsers.


Movie Types

  1. animations designed to demonstrate cell biology concepts (textbooks and education sites).
  2. living cells designed to show dynamic processes in cells (research labs and papers).

External sources:

  • iBioSeminars - From the American Society for Cell Biology (ASCB) presentations by expert researchers in specific cell biology topics. iBioSeminars
  • JoVE - Journal of Visualized Experiments an online journal that publishes peer-reviewed scientific video protocols. JoVe

How to play Movies

  • Page - Opens the movie page with the animation and additional information such as: a description of the movie, additional images, links, references and copyright information.
  • Play - Opens just the movie in the browser window, no additional information is shown.

Chemotaxis

Cells.jpg
 ‎‎Chemotaxis
Page | Play
Melanoma chemotaxis movie.jpg
 ‎‎Chemotaxis
Page | Play

Bacteria

Bacteria cell division 1.jpg
 ‎‎Bacteria Division
Page | Play
Bacteria cell division 2.jpg
 ‎‎Bacteria Division
Page | Play
Bacteria motility movie 1.jpg
 ‎‎Bacteria Motility
Page | Play

Exocytosis and Endocytosis

Exocytosis

Exocytosis movie 1.jpg
 ‎‎Exocytosis
Page | Play
Endoplasmic reticulum movie 1.jpg
 ‎‎Endoplasmic Reticulum
Page | Play
ER to Golgi FRAP-icon.jpg
 ‎‎Exocytosis
Page | Play
Post-Golgi carriers-icon.jpg
 ‎‎Exocytosis
Page | Play
Exocytosis 4-icon.jpg
 ‎‎Endocytosis
Page | Play

Endocytosis

Endosome movie 1.jpg
 ‎‎Endosomes
Page | Play
Endocytosis 1-icon.jpg
 ‎‎Endocytosis
Page | Play

Cytoskeleton

MT and MF movements | Microtubule - spindle formation

About - MT and MF movements | About - Microtubule - spindle formation

Microtubules

Microtubule movie 1.jpg
 ‎‎Microtubules
Page | Play
Microtubule movie 2.jpg
 ‎‎Microtubules
Page | Play
Microtubule movie 3.jpg
 ‎‎Microtubules
Page | Play

Microfilaments

Microfilament movie 1.jpg
 ‎‎Microfilaments
Page | Play

Nucleus

Nucleus movie 2.jpg
 ‎‎Nucleus
Page | Play
Cajal body movie 1.jpg
 ‎‎Cajal Body 1
Page | Play
Cajal body movie 2.jpg
 ‎‎Cajal Body 2
Page | Play
Cajal body movie 3.jpg
 ‎‎Cajal Body 3
Page | Play
Lamin A movie 1 icon.jpg
 ‎‎Lamin A
Page | Play

Nucleolar assembly of rRNA processing machinery in living cells

Nucleolar Organizer Regions: movie 1 - Nop52 in PNBs and nucleoli | movie 2 - fibrillarin in PNBs and NORs | movie 3 - acquisition for fibrillarin | movie 4 - Nop52 during telophase (pseudocolour) | movie 5 - Nop52 during telophase | movie 6- cell slices of Nop52 and fibrillarin | movie 7 - fibrillarin flow between a PNB and a NOR | movie 8 - Nop52 in PNBs and NORs | Cell Nucleus | PMID 11381093


Cajal body movement

Cajal bodies: movie 1 - CB dynamics | movie 2 - CB association with nucleolus | movie 3 - coiling and fibrillarin | Cell Nucleus | PMID 11134083

Nuclear pore complexes form immobile networks

Nuclear Pore Complex: movie 1 - Long term FRAP of POM121 - transmembrane nucleoporin | movie 2 - Long term FRAP of lamina B1 | movie 3 - NPC movement in interphase | movie 4 - Lamina elasticity | Cell Nucleus | PMID 11448991

Nuclear pore complexes redistributes in part to kinetochores in mammalian cells

Nuclear Pore Complex: movie 1 | movie 2 | movie 3 | movie 4 | Cell Nucleus | PMID 11564755

Mitochondria

Mitochondria movie 1.jpg
 ‎‎Mitochondria
Page | Play
Mitochondria movie 2.jpg
 ‎‎Mitochondria
Page | Play

Adhesion

Integrin movie 1-icon.jpg
 ‎‎Adhesion Integrin
Page | Play

Apoptosis

Apoptosis movie 1.jpg
 ‎‎Apoptosis
Page | Play

Translation

Translation movie 1.jpg
 ‎‎Translation
Page | Play

Methods

Cryostat.jpg
 ‎‎Cryosectioning
Page | Play

Textbook Animations

The Journal of Cell Biology


ASCB iBioSeminars

Ibioseminars-small.png

Immune Response by Ira Mellman - Part 1: Cellular Basis of the Immune Response | Part 2:Antigen Presentation and Dendritic Cells

Adhesion, Signaling and Cancer by Mary Beckerle - Part 1: Understanding Cancer From Its Beginnings | Part 2: Discovery and Characterization of a Focal Adhesion Protein Implicated in Tumor Progression | Part 3: : Focal Adhesions as Stress Sensors

Telomeres and Telomerase by Elizabeth Blackburn - Part 1: The Roles of Telomeres and Telomerase | Part 2: Telomeres and Telomerase in Human Stem Cells and in Cancer | Part 3: Stress, Telomeres and Telomerase in Humans

Apoptosis by Xiaodang Wang - Part 1: Introduction to Apoptosis | Part 2: Factors Involved in the Intrinsic Pathway of Apoptosis | Part 3: Extrinsic Pathway and Regulation of Apoptosis

Seven Transmembrane Receptors by Robert Lefkowitz - Part 1: A Brief History of Seven Transmembrane Receptor Discovery | Part 2: Beta-arrestins

Stem Cells by Elaine Fuchs - Part 1: Introduction to Stem Cells | Part 2:Tapping the Potential of Adult Stem Cells, and Summary

Separating Duplicated Chromosomes by Dick McIntosh - Part 1: Preparing for Cell Division | Part 2: Understanding Mitosis through Experimentation | Part 3: Moving Chromosome to the Spindle Poles: the mechanisms of anaphase A

Short Presentations

Methods

PLoS

  • Cytoskeleton - Motility Novel roles of formin mDia2 in lamellipodia and filopodia formation in motile cells. Yang C, Czech L, Gerboth S, Kojima S, Scita G, Svitkina T. PLoS Biol. 2007 Nov;5(11):e317. PMID: 18044991 Supporting Information Movies
  • Cytoskeleton - Motility Listeria monocytogenes invades the epithelial junctions at sites of cell extrusion. Pentecost M, Otto G, Theriot JA, Amieva MR. PLoS Pathog. 2006 Jan;2(1):e3. Epub 2006 Jan 27. PMID: 16446782 Supporting Information Movies
  • Human papillomavirus type 16 entry: retrograde cell surface transport along actin-rich protrusions. Schelhaas M, Ewers H, Rajamäki ML, Day PM, Schiller JT, Helenius A. PLoS Pathog. 2008 Sep 5;4(9):e1000148. PMID: 18773072 Supporting Information Movies
  • Real-time visualization of HIV-1 GAG trafficking in infected macrophages. Gousset K, Ablan SD, Coren LV, Ono A, Soheilian F, Nagashima K, Ott DE, Freed EO. PLoS Pathog. 2008 Mar 7;4(3):e1000015. PMID: 18369466 Supporting Information Movies
  • Real-time high resolution 3D imaging of the lyme disease spirochete adhering to and escaping from the vasculature of a living host. Moriarty TJ, Norman MU, Colarusso P, Bankhead T, Kubes P, Chaconas G. PLoS Pathog. 2008 Jun 20;4(6):e1000090. PMID: 18566656 Supporting Information Movies
  • Directed migration of positively selected thymocytes visualized in real time. Witt CM, Raychaudhuri S, Schaefer B, Chakraborty AK, Robey EA. PLoS Biol. 2005 Jun;3(6):e160. Epub 2005 May 3. Erratum in: PLoS Biol. 2005 Oct;3(10):e373. PMID: 15869324 Supporting Information Movies
  • Serial block-face scanning electron microscopy to reconstruct three-dimensional tissue nanostructure. Denk W, Horstmann H. PLoS Biol. 2004 Nov;2(11):e329. Epub 2004 Oct 19. PMID: 15514700
  • Force-induced unfolding of fibronectin in the extracellular matrix of living cells. Smith ML, Gourdon D, Little WC, Kubow KE, Eguiluz RA, Luna-Morris S, Vogel V. PLoS Biol. 2007 Oct 2;5(10):e268. PMID: 17914904


External Links

External Links Notice - The dynamic nature of the internet may mean that some of these listed links may no longer function. If the link no longer works search the web with the link text or name.

  • EMBO J - Web Focus - Imaging
  • iBioSeminars - From the American Society for Cell Biology (ASCB) presentations by expert researchers in specific cell biology topics. iBioSeminars
  • JoVE - Journal of Visualized Experiments an online journal that publishes peer-reviewed scientific video protocols. JoVe


Dr Mark Hill 2015, UNSW Cell Biology - UNSW CRICOS Provider Code No. 00098G